Supported Applications

T-Coffee

Description

a multiple sequence alignment package that can be used to align sequences or to combine the output of your favorite alignment methods (Clustal, Mafft, Probcons, Muscle...) into one unique alignment (M-Coffee).
Installation
Use the following command to install this title with the CLI client: $ sbgrid-cli install t-coffee
Primary Citation*

C. Notredame, D. G. Higgins, and J. Heringa. 2000. T-Coffee: A novel method for multiple sequence alignments. J Mol Biol. 302: 205-217.
- *Full citation information available through
Citation Note

If you use the local version of T-Coffee, cite the original 2000 paper (above). Otherwise, cite the paper corresponding to the server you have been using (click on the "cite" button associated with every server on www.tcoffee.org).