Supported Applications
SPIDER
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Description
(System for Processing Image Data from Electron microscopy and Related fields) a large image processing suite for electron microscopy.
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Usage Notes
Start the vncserver & vncviewer
vncserver :5 -cc 3 -depth 8 -localhost -geometry 1252x934
vncviewer :5When the viewer window closes, the vncserver will be killed
vncserver -kill :5
To reset the password remove the .vnc directory from your HOME directory.The OSX build is a test build of the port. If there are any problems please let us know so that we can correct them immediately.
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Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install spider
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Primary Citation*
T. Shaikh, H. Gao, W. Baxter, F. Asturias, N. Boisset, A. Leith, and J. Frank. 2008. SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs. Nat Protoc. 3: 1941-1974.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64:  26.06
OS X INTEL:  22.09 -
Other Versions
Linux 64:
8.03, 8.02, 24.01, 23.03, 22.10, 21.11, 20.12, 19.04, 18.15, 17.05, 15.06, 13.0 -
OS X INTEL:
21.11, 20.12, 19.04, 18.15, 16.04, 15.10, 14.18, 13.0
Developers
ArDean Leith, Joachim Frank