Supported Applications
Probe
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Description
an application to evaluate atomic packing, either within or between molecules. It generates “contact dots†where atoms are in close contact. Probe reads atomic coordinates from protein databank (PDB) format files and writes dot-lists for inclusion in a kinemage file.
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Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install probe
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Primary Citation*
V. B. Chen, W. B. Arendall, J. J. Headd, D. A. Keedy, R. M. Immormino, G. J. Kapral, L. W. Murray, J. S. Richardson, and D. C. Richardson. 2010. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallographica Section D: Biological Crystallography. 66(1): 12-21.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64:  2.16.130520
OS X INTEL:  2.16.130520 -
Other Versions
Linux 64:
2.13.110830 -
OS X INTEL:
2.13.110830, 2.12.071128
Developers
David Richardson, Jane Richardson