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Supported Applications

ImageJ

  • Description

    a Java image processing program inspired by NIH Image that can display, edit, analyze, process, save and print 8-bit, 16-bit, and 32-bit images. It can read many image formats including TIFF, GIF, JPEG, BMP, DICOM, FITS and "raw" and supports "stacks", a series of images that share a single window. It is multithreaded, so time-consuming operations can be performed in parallel with other operations.

  • Usage Notes

    This installation includes the LOCI BioFormats plugin for reading and editing EM image stacks.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install imagej Copy to clipboard

  • Primary Citation*

    M. D. Abràmoff, P. J. Magalhães, and S. J. Ram. 2004. Image Processing with ImageJ. Biophotonics International. 11(7): 36-42.


    • *Full citation information available through

  • Citation Note

    An alternative citation for ImageJ: "Rasband, W.S., ImageJ, U. S. National Institutes of Health, Bethesda, Maryland, USA, http://imagej.nih.gov/ij/, 1997-2014"

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  1.52a
    OS X INTEL:  1.52q

  • Other Versions

      Linux 64:

      1.51j4, 1.49

    • OS X INTEL:

      1.51j4, 1.49

  • Developers

    Wayne Rasband

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