Supported Applications


  • Description

    a simple, user-friendly tool for interactive image classification, segmentation and analysis. It is built as a modular software framework, which currently has workflows for automated (supervised) pixel- and object-level classification, automated and semi-automated object tracking, semi-automated segmentation and object counting without detection.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install ilastik Copy to clipboard
  • Primary Citation*

    C. Sommer, C. Straehle, U. Kothe, and F. A. Hamprecht. 2011. ilastik: Interactive Learning and Segmentation Toolkit. Eighth IEEE International Symposium on Biomedical Imaging (ISBI). 230-233.

    • *Full citation information available through

  • Keywords


  • Default Versions

    Linux 64:  1.3.3
    OS X INTEL:  1.3.3

  • Other Versions

      Linux 64:

      1.3.0, 1.2.1
    • OS X INTEL:

      1.3.0, 1.2.1
  • Developers

    Fred Hamprecht