Supported Applications

Description

a scientific image processing suite with a particular focus on single particle reconstruction from cryoEM images. EMAN2 is a complete refactoring of the original EMAN1 library and contains the SPARX applications.

Usage Notes

MPI use : to use MPI-enabled executable in SBGrid's EMAN2, use the mpirun.eman2 executable. This will use the MPI included with EMAN2, or the older 1.6.3 version of MPI required by older versions.

Primary Citation*

G. Tang, L. Peng, P. R. Baldwin, D. S. Mann, W. Jiang, I. Rees, and S. J. Ludtke. 2007. EMAN2: an extensible image processing suite for electron microscopy. J Struct Biol. 157(1): 38-46.

• 
  *Full citation information available through

• AppCiter

Webinars

Topic: In-situ and in-vitro subtomogram averaging to subnanometer resolution using EMAN2.3
Presenter: Steven J Ludtke, Ph.D., Professor, Baylor College of Medicine

Recorded on November 12, 2019
Host: Jason Key

Topic: EMAN2.2 for Single Particle Analysis and In-situ Structural Biology
Presenter: Steven Ludtke, Ph.D.
Professor of Biochemistry - Baylor College of Medicine
Co-Director - National Center for Macromolecular Imaging
Co-Director - Center for Computational and Integrative Biomedical Research

Date Recorded: November 14, 2017
Host: Jason Key

Topic: A quick introduction to EMAN2.1 for CryoEM Single Particle Analysis
Presenter: Steven Ludtke, Ph.D., Professor, Baylor College of Medicine

Host: Jason Key
Recorded on April 15, 2015