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DireX

  • Description

    performs efficient geometry-based conformational sampling of protein structures under experimental restraints. It combines prior structural information with experimental data through the Deformable Elastic Network (DEN) approach which drastically reduces over-fitting.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install direx Copy to clipboard

  • Primary Citation*

    G.F.Schroeder, A.T.Brunger, and M.Levitt. 2007. Combining Efficient Conformational Sampling with a Deformable Elastic Network Model Facilitates Structure Refinement at Low Resolution. Structure. 15(12): 1630-1641.


    • *Full citation information available through

  • Webinars

    Topic: DireX - Cross-validated Real-space Refinement to Density Map
    Presenter: Gunnar Schröder, PhD, Assistant Professor, University of Düsseldorf, Jülich, Germany

    Host: Pete Meyer
    Recorded on May 10, 2016

  • Keywords

    Analysis

  • Default Versions

    Linux 64:  0.7.1-rev409
    OS X INTEL:  0.7.1-rev409

  • Other Versions

      Linux 64:

      0.7.0, 0.6.2

    • OS X INTEL:

      0.7.0, 0.6.2

  • Developers

    Gunnar Schroeder

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