Supported Applications


  • Description

    a neural network based algorithm for heterogeneous cryo-EM reconstruction. In particular, the method models a continuous distribution over 3D structures by using a neural network based representation for the volume.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install cryodrgn Copy to clipboard
  • Primary Citation*

    E. D. Zhong, T. Bepler, B. Berger, and J. H. Davis. 2021. CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks. Nature methods. 18(2): 176-185.

    • *Full citation information available through

  • Webinars

    Topic: CryoDRGN: Deep generative models for reconstructing heterogeneous protein structures from cryo-EM
    Speaker: Ellen Zhong, MIT, Laboratories of Bonnie Berger and Joey Davis

    Host: Shaun Rawson
    Recorded on: May 15, 2020

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  1.1.2

  • Other Versions

      Linux 64:

      1.1.0, 0.3.4_cu11, 0.3.4, 0.3.3b
  • Developers

    Ellen Zhong, Bonnie Berger